BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H10LP1|AL427971
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig152 249 8e-66
>3x_Contig152
Length = 823
Score = 249 bits (121), Expect = 8e-66
Identities = 127/132 (96%)
Strand = Plus / Plus
Query: 473 ccctgcaaaccctacaatattattaggggtttccccacggtcaccttcccgacccacaag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ccctgcaaaccctacaatattattaggggtttccccacggtcaccttcccgacccacaag 139
Query: 533 gagacggggattcttacttatttbatatcccgcggattcatgttatgaatccgcgnaatt 592
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 140 gagacggggattcttacttattttatatcccgcggattcatgttatgaatccgcggaatt 199
Query: 593 attatvtbakat 604
||||| | | ||
Sbjct: 200 attatattatat 211
Score = 125 bits (61), Expect = 1e-28
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 742 agtagggagtaataaatttargataaccattattataataattaattattataataatat 801
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agtagggagtaataaatttaggataaccattattataataattaattattataataatat 409
Query: 802 ttt 804
|||
Sbjct: 410 ttt 412
Score = 119 bits (58), Expect = 8e-27
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 394 taccagcattcttagaatgattaaatgaacaataattatataattbataattaakaagtt 453
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 1 taccagcattcttagaatgattaaatgaacaataattatataatttataattaataaatt 60
Query: 454 atatat 459
||||||
Sbjct: 61 atatat 66
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,273
Number of Sequences: 1807
Number of extensions: 10273
Number of successful extensions: 1666
Number of sequences better than 1.0e-20: 1
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.2 bits)